SMTL ID : 6oaw.1

Crystal structure of a CRISPR Cas-related protein

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

31 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 2 residues within 4Å: Chain A: Y.226, R.227 Ligand excluded by PLIP UNX.2: 4 residues within 4Å: Chain A: A.32, E.170, L.174 Ligands: UNX.3 Ligand excluded by PLIP UNX.3: 5 residues within 4Å: Chain A: S.31, A.32, L.174 Chain B: K.234 Ligands: UNX.2 Ligand excluded by PLIP UNX.4: 4 residues within 4Å: Chain A: I.325, L.326, Y.327 Ligands: UNX.31 Ligand excluded by PLIP UNX.5: 6 residues within 4Å: Chain A: Y.67, S.70, L.71, F.90, E.92, E.153 Ligand excluded by PLIP UNX.6: 6 residues within 4Å: Chain A: S.310, P.350, V.353, I.366, P.369, S.372 Ligand excluded by PLIP UNX.7: 3 residues within 4Å: Chain A: A.21, S.136, C.138 Ligand excluded by PLIP UNX.8: 2 residues within 4Å: Chain A: M.55, R.134 Ligand excluded by PLIP UNX.9: 5 residues within 4Å: Chain A: T.60, D.64, C.138, D.140, L.141 Ligand excluded by PLIP UNX.10: 2 residues within 4Å: Chain A: S.65, D.187 Ligand excluded by PLIP UNX.11: 2 residues within 4Å: Chain A: I.82, G.83 Ligand excluded by PLIP UNX.12: 2 residues within 4Å: Chain A: P.85, L.86 Ligand excluded by PLIP UNX.13: 4 residues within 4Å: Chain A: S.201, Y.203, R.284, L.285 Ligand excluded by PLIP UNX.14: 2 residues within 4Å: Chain A: V.229, S.230 Ligand excluded by PLIP UNX.15: 4 residues within 4Å: Chain A: K.253, A.254, H.289, S.292 Ligand excluded by PLIP UNX.16: 3 residues within 4Å: Chain A: Y.355, N.358 Chain B: K.359 Ligand excluded by PLIP UNX.17: 3 residues within 4Å: Chain A: P.18, Y.19, I.20 Ligand excluded by PLIP UNX.18: 2 residues within 4Å: Chain A: R.132, V.133 Ligand excluded by PLIP UNX.19: 2 residues within 4Å: Chain A: D.14, K.15 Ligand excluded by PLIP UNX.20: 4 residues within 4Å: Chain A: E.232, Y.233, D.299, R.301 Ligand excluded by PLIP UNX.21: 2 residues within 4Å: Chain A: D.177, E.181 Ligand excluded by PLIP UNX.22: 2 residues within 4Å: Chain B: R.389, E.390 Ligand excluded by PLIP UNX.23: 3 residues within 4Å: Chain A: L.102, D.103, S.106 Ligand excluded by PLIP UNX.24: 2 residues within 4Å: Chain A: K.105, E.108 Ligand excluded by PLIP UNX.25: 2 residues within 4Å: Chain B: R.301, Y.355 Ligand excluded by PLIP UNX.26: 3 residues within 4Å: Chain B: Y.327, Q.328, Y.355 Ligand excluded by PLIP UNX.27: 2 residues within 4Å: Chain B: N.358, M.376 Ligand excluded by PLIP UNX.28: 5 residues within 4Å: Chain A: Y.387 Chain B: F.357, G.361, G.364, Y.380 Ligand excluded by PLIP UNX.29: 2 residues within 4Å: Chain A: K.362 Chain B: E.382 Ligand excluded by PLIP UNX.30: 2 residues within 4Å: Chain B: I.331, N.335 Ligand excluded by PLIP UNX.31: 3 residues within 4Å: Chain A: Y.327 Chain B: Y.327 Ligands: UNX.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, H. et al., Structural insights into the modulatory role of the accessory protein WYL1 in the Type VI-D CRISPR-Cas system. Nucleic Acids Res. (2019)

Release Date

2019-04-10

Peptides

WYL1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

WYL1