SMTL ID : 6oco.1

HUMAN PI3KDELTA IN COMPLEX WITH COMPOUND 6

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.58 Å

Oligo State

hetero-1-1-mer

Ligands

1 x M5V: 4-[(1S,4S)-5-(3-chlorophenyl)-2,5-diazabicyclo[2.2.1]heptan-2-yl]-2-(pyridin-3-yl)pyrimidine-5-carbonitrile(Non-covalent)

M5V.1: 14 residues within 4Å: Chain A: K.692, T.734, F.735, M.736, D.737, W.744, Y.797, E.810, V.811, V.812, S.815, D.816, M.884, I.894 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:T.734, A:W.744, A:W.744, A:I.894 Hydrogen bonds: A:V.812 pi-Stacking: A:Y.797 Halogen bonds: A:K.692

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhou, H. et al., Discovery and optimization of heteroaryl piperazines as potent and selective PI3K delta inhibitors. Bioorg.Med.Chem.Lett. (2020)

Release Date

2019-12-11

Peptides

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform: A
Phosphatidylinositol 3-kinase regulatory subunit alpha: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform

Phosphatidylinositol 3-kinase regulatory subunit alpha

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