SMTL ID : 6odm.1

Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY

Oligo State

hetero-4-4-2-4-1-2-2-mer

Ligands

None

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH

Citation

Liu, Y.T. et al., Cryo-EM structures of herpes simplex virus type 1 portal vertex and packaged genome. Nature (2019)

Release Date

2019-06-19

Peptides

Major capsid protein: ABCD
Small capsomere-interacting protein: EFGH
Triplex capsid protein 1: IQ
Triplex capsid protein 2: JKRS
Capsid vertex component 1: L
Capsid vertex component 2: MN
Large tegument protein deneddylase: OP

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
T

B
W

C
S

D
X

E
L

F
P

G
E

H
F

I
5

Q
D

J
6

K
7

R
H

S
A

L
C

M
G

N
K

O
O

P
B

Major capsid protein

Small capsomere-interacting protein

Triplex capsid protein 1

Triplex capsid protein 2

Capsid vertex component 1

Capsid vertex component 2

Large tegument protein deneddylase

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