SMTL ID : 6ogj.1

MeCP2 MBD in complex with DNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

8 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 4 residues within 4Å: Chain A: Y.44, D.45 Chain D: T.4, A.5 No protein-ligand interaction detected (PLIP) UNX.2: 2 residues within 4Å: Chain B: Q.34, K.36 No protein-ligand interaction detected (PLIP) UNX.3: 2 residues within 4Å: Chain B: E.61, A.64 No protein-ligand interaction detected (PLIP) UNX.4: 3 residues within 4Å: Chain C: G.5 Chain D: T.9 Ligands: UNX.8 No protein-ligand interaction detected (PLIP) UNX.5: 5 residues within 4Å: Chain C: G.5, T.6, G.7 Chain D: A.7, C.8 No protein-ligand interaction detected (PLIP) UNX.6: 4 residues within 4Å: Chain A: K.36, S.37 Chain C: G.5, T.6 No protein-ligand interaction detected (PLIP) UNX.7: 4 residues within 4Å: Chain A: R.35, S.40, K.43 Chain C: T.8 No protein-ligand interaction detected (PLIP) UNX.8: 3 residues within 4Å: Chain D: T.9, C.10 Ligands: UNX.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lei, M. et al., Plasticity at the DNA recognition site of the MeCP2 mCG-binding domain. Biochim Biophys Acta Gene Regul Mech (2019)

Release Date

2019-05-01

Peptides

Methyl-CpG-binding protein 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Methyl-CpG-binding protein 2