SMTL ID : 6ogn.1

Crystal structure of mouse protein arginine methyltransferase 7 in complex with SGC8158 chemical probe

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.219, C.366, C.368, H.371 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.219, A:C.366, A:C.368, A:H.371

1 x MJ7: 5'-S-(4-{[(4'-chloro[1,1'-biphenyl]-3-yl)methyl]amino}butyl)-5'-thioadenosine(Non-covalent)

MJ7.2: 20 residues within 4Å: Chain A: Y.35, R.44, Y.48, I.71, G.72, I.93, E.94, V.95, F.96, K.121, H.122, S.123, L.145, F.146, E.153, S.158, W.282, I.284, M.286, C.294 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:R.44, A:W.282 Hydrogen bonds: A:V.95, A:S.123, A:S.123, A:S.158 pi-Stacking: A:H.122, A:W.282

3 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.3: 1 residues within 4Å: Chain A: E.207 No protein-ligand interaction detected (PLIP) UNX.4: 3 residues within 4Å: Chain A: S.214, R.441, V.445 No protein-ligand interaction detected (PLIP) UNX.5: 3 residues within 4Å: Chain A: Y.495, T.678, G.679 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Szewczyk, M.M. et al., Pharmacological inhibition of PRMT7 links arginine monomethylation to the cellular stress response. Nat Commun (2020)

Release Date

2019-04-17

Peptides

Protein arginine N-methyltransferase 7: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein arginine N-methyltransferase 7

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