SMTL ID : 6oqx.1

Human Liver Receptor Homolog-1 bound to the agonist 5N and a fragment of the Tif2 coregulator

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x N1V: (8beta,11alpha,12alpha)-8-(1-phenylethenyl)-1,6:7,14-dicycloprosta-1,3,5,7(14)-tetraen-11-yl sulfamate(Non-covalent)

N1V.1: 25 residues within 4Å: Chain A: T.45, F.46, M.49, C.50, M.52, A.53, T.56, L.90, I.91, H.94, R.97, I.107, L.109, V.110, I.120, Q.123, A.124, L.128, L.131, M.132, A.135, I.213, A.217, L.221, L.236 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:T.45, A:F.46, A:M.49, A:A.53, A:I.91, A:H.94, A:I.120, A:A.124, A:L.131, A:A.135, A:L.221, A:L.221 Hydrogen bonds: A:M.52, A:V.110 Water bridges: A:R.97, A:R.97, A:R.97, A:R.97 Salt bridges: A:R.97

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mays, S.G. et al., Development of the First Low Nanomolar Liver Receptor Homolog-1 Agonist through Structure-guided Design. J.Med.Chem. (2019)

Release Date

2019-08-28

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor coactivator 2

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