- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.14 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x NAJ: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)(Non-covalent)
NAJ.3: 32 residues within 4Å:- Chain A: C.46, R.47, S.48, H.51, W.93, C.174, T.178, G.199, L.200, G.201, G.202, V.203, V.222, D.223, I.224, N.225, K.228, V.268, I.269, G.270, R.271, V.292, G.293, V.294, A.317, I.318, F.319, L.362, R.369
- Chain B: L.309
- Ligands: ZN.1, ETF.4
26 PLIP interactions:26 interactions with chain A- Hydrophobic interactions: A:T.178, A:V.203
- Hydrogen bonds: A:R.47, A:H.51, A:T.178, A:L.200, A:G.201, A:G.202, A:V.203, A:I.224, A:I.269, A:R.271, A:V.292, A:V.294, A:F.319
- Water bridges: A:R.47, A:R.47, A:G.204, A:K.228, A:R.271, A:G.320, A:S.367, A:R.369, A:R.369
- Salt bridges: A:R.47, A:R.369
NAJ.9: 31 residues within 4Å:- Chain A: L.309
- Chain B: C.46, R.47, S.48, H.51, W.93, C.174, T.178, G.199, L.200, G.201, G.202, V.203, D.223, I.224, N.225, K.228, V.268, I.269, G.270, R.271, V.292, G.293, V.294, A.317, I.318, F.319, L.362, R.369
- Ligands: ZN.7, ETF.10
27 PLIP interactions:27 interactions with chain B- Hydrophobic interactions: B:T.178, B:V.203
- Hydrogen bonds: B:R.47, B:H.51, B:L.200, B:G.201, B:G.202, B:V.203, B:I.224, B:I.269, B:R.271, B:V.292, B:V.294, B:F.319
- Water bridges: B:R.47, B:R.47, B:G.204, B:K.228, B:K.228, B:R.271, B:G.320, B:G.320, B:S.367, B:R.369, B:R.369
- Salt bridges: B:R.47, B:R.369
- 2 x ETF: TRIFLUOROETHANOL(Non-covalent)
ETF.4: 10 residues within 4Å:- Chain A: C.46, S.48, L.57, H.67, W.93, L.116, C.174, V.294
- Ligands: ZN.1, NAJ.3
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.48
ETF.10: 10 residues within 4Å:- Chain B: C.46, S.48, L.57, H.67, W.93, L.116, C.174, V.294
- Ligands: ZN.7, NAJ.9
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.48
- 3 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
MRD.5: 4 residues within 4Å:- Chain A: K.338, K.339, F.340, A.341
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.339
MRD.6: 3 residues within 4Å:- Chain A: R.218, T.238, E.239
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:R.218
- Hydrogen bonds: A:T.238
MRD.11: 3 residues within 4Å:- Chain B: K.338, K.339, F.340
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:K.338
- Water bridges: B:K.338
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, K. et al., Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer. Biochemistry (2020)
- Release Date
- 2019-05-22
- Peptides
- Alcohol dehydrogenase E chain: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.14 Å
- Oligo State
- homo-dimer
- Ligands
- 4 x ZN: ZINC ION(Non-covalent)
- 2 x NAJ: NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM)(Non-covalent)
- 2 x ETF: TRIFLUOROETHANOL(Non-covalent)
- 3 x MRD: (4R)-2-METHYLPENTANE-2,4-DIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kim, K. et al., Substitutions of Amino Acid Residues in the Substrate Binding Site of Horse Liver Alcohol Dehydrogenase Have Small Effects on the Structures but Significantly Affect Catalysis of Hydrogen Transfer. Biochemistry (2020)
- Release Date
- 2019-05-22
- Peptides
- Alcohol dehydrogenase E chain: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B