SMTL ID : 6oxb.2 (5 other biounits)

First bromo-adjacent homology (BAH) domain of human Polybromo-1 (PBRM1)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.86 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: R.14, K.94 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.14 Salt bridges: A:R.14, A:K.94 SO4.2: 2 residues within 4Å: Chain A: K.140, K.143 7 PLIP interactions: 7 interactions with chain A Water bridges: A:R.131, A:R.131, A:R.131, A:K.143 Salt bridges: A:R.131, A:K.140, A:K.143 SO4.3: 2 residues within 4Å: Chain A: K.140, K.141 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.141 Water bridges: A:R.79, A:R.79 SO4.4: 3 residues within 4Å: Chain A: K.80, V.166, A.167 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.167 Salt bridges: A:K.80 SO4.5: 2 residues within 4Å: Chain A: S.25, K.103 4 PLIP interactions: 4 interactions with chain A Water bridges: A:S.25, A:S.25, A:K.103 Salt bridges: A:K.103 SO4.6: 4 residues within 4Å: Chain A: P.37, A.38, E.39, H.45 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:A.38 Salt bridges: A:H.45

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.7: 1 residues within 4Å: Chain A: Q.18 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Petojevic, T. et al., Polyvalent nucleosome recognition by Polybromo-1 anchors chromatin remodeling. To Be Published

Release Date

2020-05-20

Peptides

Protein polybromo-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protein polybromo-1

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