SMTL ID : 6p11.1

Structure of spastin AAA domain (T692A mutant) in complex with JNJ-7706621 inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

monomer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 8 residues within 4Å: Chain A: P.80, P.81, G.82, N.83, G.84, K.85, T.86 Ligands: SKE.2 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:G.82, A:N.83, A:G.84, A:K.85, A:T.86, A:T.86 Water bridges: A:N.83, A:T.86, A:L.87, A:N.185 Salt bridges: A:K.85

1 x SKE: 4-({5-amino-1-[(2,6-difluorophenyl)carbonyl]-1H-1,2,4-triazol-3-yl}amino)benzenesulfonamide(Non-covalent)

SKE.2: 16 residues within 4Å: Chain A: D.40, I.41, A.42, Q.44, G.82, N.83, G.84, L.87, L.215, R.218, L.219, K.222, G.244, S.245, A.248 Ligands: SO4.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:L.215, A:A.248 Hydrogen bonds: A:D.40, A:A.42, A:A.42 Water bridges: A:Q.44

1 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.3: 5 residues within 4Å: Chain A: L.24, E.28, S.107, L.108, K.111 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.24, A:E.28, A:L.108 Hydrogen bonds: A:S.107 Water bridges: A:S.107

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pisa, R. et al., Analyzing Resistance to Design Selective Chemical Inhibitors for AAA Proteins. Cell Chem Biol (2019)

Release Date

2019-07-24

Peptides

Drosophila melanogaster Spastin AAA domain: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Drosophila melanogaster Spastin AAA domain

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