SMTL ID : 6p1p.1

Pre-catalytic ternary complex of human DNA Polymerase Mu with 1-nt gapped substrate containing template 8OG and bound incoming dCMPNPP

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.75 Å
Oligo State
monomer
Ligands
1 x DC- DG- DG- DC- 8OG- DT- DA- DC- DG: DNA (5'-D(*CP*GP*GP*CP*(8OG)P*TP*AP*CP*G)-3')(Non-covalent)
1 x DC- DG- DT- DA: DNA (5'-D(*CP*GP*TP*A)-3')(Non-covalent)
1 x DG- DC- DC- DG: DNA (5'-D(P*GP*CP*CP*G)-3')(Non-covalent)
1 x 0KX: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine(Non-covalent)
2 x MG: MAGNESIUM ION(Non-covalent)
1 x NA: SODIUM ION(Non-functional Binders)
1 x CL: CHLORIDE ION(Non-functional Binders)
4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kaminski, A.M. et al., Unexpected behavior of DNA polymerase Mu opposite template 8-oxo-7,8-dihydro-2'-guanosine. Nucleic Acids Res. (2019)
Release Date
2019-09-04
Peptides
DNA-directed DNA/RNA polymerase mu: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA-directed DNA/RNA polymerase mu

Related Entries With Identical Sequence

4ycx.1 | 4yd1.1 | 4yd2.1 | 5twp.1 | 5twq.1 | 6p1m.1 | 6p1n.1 | 6p1o.1 | 6p1q.1 | 6p1r.1 | 6p1s.1 | 6p1t.1 | 6p1u.1 | 6p1v.1 | 6p1w.1