- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x NRY: 1-(4-fluorophenyl)-2-[2-(4-fluorophenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium(Non-covalent)
- 12 x GOL: GLYCEROL(Non-functional Binders)
GOL.2: 4 residues within 4Å:- Chain A: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:H.125, A:R.317, A:R.317, A:M.319, A:R.373
- Water bridges: A:R.126
GOL.3: 5 residues within 4Å:- Chain A: P.61, T.62, Y.84, S.131, Y.133
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:T.62, A:Y.84, A:S.131, A:Y.133, A:Y.133
GOL.11: 4 residues within 4Å:- Chain B: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:H.125, B:R.317, B:R.317, B:M.319, B:R.373
- Water bridges: B:R.126
GOL.12: 5 residues within 4Å:- Chain B: P.61, T.62, Y.84, S.131, Y.133
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:T.62, B:Y.84, B:S.131, B:Y.133, B:Y.133
GOL.20: 4 residues within 4Å:- Chain C: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain C- Hydrogen bonds: C:H.125, C:R.317, C:R.317, C:M.319, C:R.373
- Water bridges: C:R.126
GOL.21: 5 residues within 4Å:- Chain C: P.61, T.62, Y.84, S.131, Y.133
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:T.62, C:Y.84, C:S.131, C:Y.133, C:Y.133
GOL.29: 4 residues within 4Å:- Chain D: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain D- Hydrogen bonds: D:H.125, D:R.317, D:R.317, D:M.319, D:R.373
- Water bridges: D:R.126
GOL.30: 5 residues within 4Å:- Chain D: P.61, T.62, Y.84, S.131, Y.133
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:T.62, D:Y.84, D:S.131, D:Y.133
GOL.38: 4 residues within 4Å:- Chain E: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain E- Hydrogen bonds: E:H.125, E:R.317, E:R.317, E:M.319, E:R.373
- Water bridges: E:R.126
GOL.39: 5 residues within 4Å:- Chain E: P.61, T.62, Y.84, S.131, Y.133
4 PLIP interactions:4 interactions with chain E- Hydrogen bonds: E:T.62, E:Y.84, E:S.131, E:Y.133
GOL.47: 4 residues within 4Å:- Chain F: H.125, R.317, M.319, R.373
6 PLIP interactions:6 interactions with chain F- Hydrogen bonds: F:H.125, F:R.317, F:R.317, F:M.319, F:R.373
- Water bridges: F:R.126
GOL.48: 5 residues within 4Å:- Chain F: P.61, T.62, Y.84, S.131, Y.133
4 PLIP interactions:4 interactions with chain F- Hydrogen bonds: F:T.62, F:Y.84, F:S.131, F:Y.133
- 6 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
PEG.4: 10 residues within 4Å:- Chain A: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.7
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:L.261, A:R.262, A:H.269, A:T.289
PEG.13: 10 residues within 4Å:- Chain B: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.16
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:L.261, B:R.262, B:H.269, B:T.289
PEG.22: 10 residues within 4Å:- Chain C: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.25
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:L.261, C:R.262, C:H.269, C:T.289
PEG.31: 10 residues within 4Å:- Chain D: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.34
3 PLIP interactions:3 interactions with chain D- Hydrogen bonds: D:L.261, D:R.262, D:H.269
PEG.40: 10 residues within 4Å:- Chain E: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.43
3 PLIP interactions:3 interactions with chain E- Hydrogen bonds: E:L.261, E:R.262, E:H.269
PEG.49: 10 residues within 4Å:- Chain F: L.261, R.262, H.269, I.287, I.288, T.289, H.290, D.293, Q.417
- Ligands: SO4.52
3 PLIP interactions:3 interactions with chain F- Hydrogen bonds: F:L.261, F:R.262, F:H.269
- 30 x SO4: SULFATE ION(Non-functional Binders)
SO4.5: 8 residues within 4Å:- Chain A: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.6: 6 residues within 4Å:- Chain A: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.7: 7 residues within 4Å:- Chain A: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.4
Ligand excluded by PLIPSO4.8: 7 residues within 4Å:- Chain A: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.9: 6 residues within 4Å:- Chain A: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.1
Ligand excluded by PLIPSO4.14: 8 residues within 4Å:- Chain B: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.15: 6 residues within 4Å:- Chain B: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.16: 7 residues within 4Å:- Chain B: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.13
Ligand excluded by PLIPSO4.17: 7 residues within 4Å:- Chain B: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.18: 6 residues within 4Å:- Chain B: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.10
Ligand excluded by PLIPSO4.23: 8 residues within 4Å:- Chain C: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.24: 6 residues within 4Å:- Chain C: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.25: 7 residues within 4Å:- Chain C: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.22
Ligand excluded by PLIPSO4.26: 7 residues within 4Å:- Chain C: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.27: 6 residues within 4Å:- Chain C: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.19
Ligand excluded by PLIPSO4.32: 8 residues within 4Å:- Chain D: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.33: 6 residues within 4Å:- Chain D: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.34: 7 residues within 4Å:- Chain D: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.31
Ligand excluded by PLIPSO4.35: 7 residues within 4Å:- Chain D: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.36: 6 residues within 4Å:- Chain D: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.28
Ligand excluded by PLIPSO4.41: 8 residues within 4Å:- Chain E: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.42: 6 residues within 4Å:- Chain E: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.43: 7 residues within 4Å:- Chain E: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.40
Ligand excluded by PLIPSO4.44: 7 residues within 4Å:- Chain E: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.45: 6 residues within 4Å:- Chain E: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.37
Ligand excluded by PLIPSO4.50: 8 residues within 4Å:- Chain F: P.92, G.93, R.328, G.329, Y.330, A.331, S.412, D.413
Ligand excluded by PLIPSO4.51: 6 residues within 4Å:- Chain F: W.33, R.57, V.60, P.61, T.62, A.65
Ligand excluded by PLIPSO4.52: 7 residues within 4Å:- Chain F: R.262, I.288, T.289, H.290, Q.417, T.418
- Ligands: PEG.49
Ligand excluded by PLIPSO4.53: 7 residues within 4Å:- Chain F: A.367, E.368, I.369, E.370, R.396, T.397, K.398
Ligand excluded by PLIPSO4.54: 6 residues within 4Å:- Chain F: F.44, D.46, S.103, F.104, F.422
- Ligands: NRY.46
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Green, K.D. et al., Probing the Robustness of Inhibitors of Tuberculosis Aminoglycoside Resistance Enzyme Eis by Mutagenesis. Acs Infect Dis. (2019)
- Release Date
- 2019-09-04
- Peptides
- N-acetyltransferase Eis: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.55 Å
- Oligo State
- homo-hexamer
- Ligands
- 6 x NRY: 1-(4-fluorophenyl)-2-[2-(4-fluorophenyl)-2-oxoethyl]pyrrolo[1,2-a]pyrazin-2-ium(Non-covalent)
- 12 x GOL: GLYCEROL(Non-functional Binders)
- 6 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)
- 30 x SO4: SULFATE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Green, K.D. et al., Probing the Robustness of Inhibitors of Tuberculosis Aminoglycoside Resistance Enzyme Eis by Mutagenesis. Acs Infect Dis. (2019)
- Release Date
- 2019-09-04
- Peptides
- N-acetyltransferase Eis: ABCDEF
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
AD
AE
AF
A