SMTL ID : 6p40.1

Crystal Structure of Full Length APOBEC3G FKL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-dimer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: H.72, E.74, C.104, C.107 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.72, A:C.104, A:C.107 ZN.2: 3 residues within 4Å: Chain A: H.252, C.282, C.285 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.252, A:C.282, A:C.285 ZN.3: 4 residues within 4Å: Chain B: H.72, E.74, C.104, C.107 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.72, B:C.104, B:C.107, H2O.4 ZN.4: 3 residues within 4Å: Chain B: H.252, C.282, C.285 3 PLIP interactions: 3 interactions with chain B Metal complexes: B:H.252, B:C.282, B:C.285

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, H. et al., Understanding the structural basis of HIV-1 restriction by the full length double-domain APOBEC3G. Nat Commun (2020)

Release Date

2020-02-12

Peptides

Apolipoprotein B mRNA editing enzyme, catalytic peptide-like 3G: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Apolipoprotein B mRNA editing enzyme, catalytic peptide-like 3G