SMTL ID : 6p4d.1

Hen egg lysozyme (HEL) containing three point mutations (HEL3x): R21Q, R73E, and D101R

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

monomer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 4 residues within 4Å: Chain A: S.24, G.26, Q.121, I.124 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: R.14, H.15, D.87, I.88 Ligand excluded by PLIP CL.3: 2 residues within 4Å: Chain A: K.33, F.38 Ligand excluded by PLIP CL.4: 4 residues within 4Å: Chain A: G.4, R.5, C.6, E.7 Ligand excluded by PLIP

1 x NA: SODIUM ION(Non-functional Binders)

NA.5: 5 residues within 4Å: Chain A: S.60, R.61, C.64, S.72, E.73 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:C.64 Water bridges: A:S.72

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 7 residues within 4Å: Chain A: L.56, Q.57, I.58, N.59, W.63, A.107, W.108 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:N.59, A:W.63, A:A.107 Water bridges: A:E.35, A:D.52, A:D.52, A:A.107, A:V.109

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Burnett, D.L. et al., Conformational diversity facilitates antibody mutation trajectories and discrimination between foreign and self-antigens. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-05-27

Peptides

Lysozyme C: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Lysozyme C