SMTL ID : 6pad.1

Binding of chloromethyl ketone substrate analogues to crystalline papain

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

monomer

Ligands

1 x 0PC: Nalpha-[(benzyloxy)carbonyl]-N-[(1S)-3-chloro-1-methyl-2-oxopropyl]-L-phenylalaninamide(Covalent)

0PC.1: 13 residues within 4Å: Chain A: Q.19, G.23, S.24, C.25, W.26, Y.61, G.65, G.66, Y.67, V.133, V.157, D.158, H.159 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:V.133, A:V.157 Hydrogen bonds: A:Q.19, A:C.25, A:G.65, A:G.66, A:D.158 pi-Stacking: A:Y.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Drenth, J. et al., Binding of chloromethyl ketone substrate analogues to crystalline papain. Biochemistry (1976)

Release Date

1977-04-12

Peptides

PAPAIN: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PAPAIN

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