- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ASP: ASPARTIC ACID(Non-covalent)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.2: 2 residues within 4Å:- Chain A: K.243
- Ligands: EDO.3
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.243
- Water bridges: A:K.243
EDO.3: 3 residues within 4Å:- Chain A: K.243
- Ligands: EDO.2, EDO.4
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.243
EDO.4: 4 residues within 4Å:- Chain A: G.241, K.243
- Ligands: EDO.3, EDO.5
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:K.243
- Hydrogen bonds: A:K.243
EDO.5: 6 residues within 4Å:- Chain A: K.243, K.269, G.270, V.271
- Ligands: EDO.4, EDO.6
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:K.243
EDO.6: 3 residues within 4Å:- Chain A: K.269, G.270
- Ligands: EDO.5
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.243, A:G.270
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lubkowski, J. et al., Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci. (2019)
- Release Date
- 2019-09-04
- Peptides
- L-asparaginase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.60 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x ASP: ASPARTIC ACID(Non-covalent)
- 5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 1 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Lubkowski, J. et al., Geometric considerations support the double-displacement catalytic mechanism of l-asparaginase. Protein Sci. (2019)
- Release Date
- 2019-09-04
- Peptides
- L-asparaginase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D