SMTL ID : 6pgn.1

PagF single mutant with GPP

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

monomer

Ligands

1 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 5 residues within 4Å: Chain A: E.184, Y.186, Y.235, R.288 Ligands: GPP.2 4 PLIP interactions: 1 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:E.184, H2O.1, H2O.1, H2O.5

1 x GPP: GERANYL DIPHOSPHATE(Non-covalent)

GPP.2: 15 residues within 4Å: Chain A: R.65, K.136, H.138, R.140, L.170, E.184, Y.186, E.188, L.220, A.222, Y.235, W.271, R.288, Y.290 Ligands: MG.1 26 PLIP interactions: 26 interactions with chain A Hydrophobic interactions: A:L.170, A:Y.186, A:L.220, A:A.222, A:Y.235, A:W.271, A:W.271, A:W.271, A:Y.290 Hydrogen bonds: A:Y.186, A:Y.186, A:Y.235 Water bridges: A:R.65, A:R.65, A:R.65, A:E.184, A:E.184, A:E.184, A:E.184, A:R.288, A:R.288 Salt bridges: A:R.65, A:K.136, A:K.136, A:H.138, A:R.288

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Estrada, P. et al., A Single Amino Acid Switch Alters the Isoprene Donor Specificity inRibosomally Synthesized and Post-Translationally Modified Peptide Prenyltransferases. J. Am. Chem. Soc. (2018)

Release Date

2019-07-24

Peptides

PagF: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PagF