SMTL ID : 6pi7.1 (1 other biounit)

Crystal structure of the TDRD2 extended Tudor domain in complex with an antibody fragment and the PIWIL1 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-1-1-1-1-mer

Ligands

4 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.1: 4 residues within 4Å: Chain A: I.121, D.178, L.181, E.191 No protein-ligand interaction detected (PLIP) UNX.2: 1 residues within 4Å: Chain A: S.25 No protein-ligand interaction detected (PLIP) UNX.3: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) UNX.4: 2 residues within 4Å: Chain A: E.6 Chain C: Y.57 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, S. et al., Lesson from a Fab-enabled co-crystallization study of TDRD2 and PIWIL1. Methods (2020)

Release Date

2019-07-24

Peptides

Tudor and KH domain-containing protein: A
Uncharacterized protein: B
Fab antigen-binding fragment: C
Piwi-like protein 1: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
G

Tudor and KH domain-containing protein

Uncharacterized protein

Fab antigen-binding fragment

Piwi-like protein 1

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