SMTL ID : 6pim.1

Crystal Structure of Human Protocadherin-1 EC3-4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)

CA.1: 7 residues within 4Å: Chain A: E.21, E.78, D.109, M.110, D.112, D.153 Ligands: CA.3 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:E.21, A:E.78, A:D.109, A:M.110, A:D.153 CA.2: 6 residues within 4Å: Chain A: N.111, N.113, D.151, D.153, N.157, D.210 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.113, A:D.151, A:D.153, A:N.157, A:D.210 CA.3: 6 residues within 4Å: Chain A: E.21, D.76, E.78, D.112, N.113 Ligands: CA.1 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:E.21, A:D.76, A:E.78, A:D.112 CA.4: 6 residues within 4Å: Chain A: N.4, N.6, D.36, D.38, N.42, D.91 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:N.6, A:D.36, A:D.38, A:N.42, A:D.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Modak, D. et al., Identification of an adhesive interface for the non-clustered delta 1 protocadherin-1 involved in respiratory diseases. Commun Biol (2019)

Release Date

2019-10-09

Peptides

Protocadherin-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Protocadherin-1