SMTL ID : 6pno.1

Human GSTO1-1 complexed with 2-chloro-N-(4-chloro-3-(N-isopropylsulfamoyl)phenyl)acetamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.82 Å

Oligo State

homo-dimer

Ligands

2 x ORM: 2-chloro-N-{4-chloro-3-[(propan-2-yl)sulfamoyl]phenyl}acetamide(Covalent)

ORM.1: 8 residues within 4Å: Chain A: C.31, P.32, F.33, V.71, V.126, G.127, Y.228 Ligands: TLA.2 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:F.33, A:V.71, A:Y.228 ORM.6: 8 residues within 4Å: Chain B: C.31, P.32, F.33, V.71, V.126, G.127, Y.228 Ligands: TLA.7 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:F.33, B:V.71, B:Y.228

2 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.2: 7 residues within 4Å: Chain A: F.33, L.70, V.71, P.72, E.84, S.85 Ligands: ORM.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:E.84, A:E.84, A:S.85 Water bridges: A:N.66 TLA.7: 7 residues within 4Å: Chain B: F.33, L.70, V.71, P.72, E.84, S.85 Ligands: ORM.6 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:E.84, B:S.85 Water bridges: B:N.66

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.38, H.48, V.50, L.214 6 PLIP interactions: 6 interactions with chain A Water bridges: A:R.38, A:R.38, A:K.42, A:K.42 Salt bridges: A:R.38, A:H.48 SO4.4: 4 residues within 4Å: Chain A: E.20, G.21, S.77, Q.78 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.21, A:S.77, A:Q.78, A:Q.78 Water bridges: A:S.77, A:Y.96 SO4.5: 2 residues within 4Å: Chain A: A.5, R.29 4 PLIP interactions: 4 interactions with chain A Water bridges: A:R.29, A:R.38, A:R.38, A:R.38 SO4.8: 4 residues within 4Å: Chain B: R.38, H.48, V.50, L.214 6 PLIP interactions: 6 interactions with chain B Water bridges: B:R.38, B:R.38, B:K.42, B:K.42 Salt bridges: B:R.38, B:H.48 SO4.9: 4 residues within 4Å: Chain B: E.20, G.21, S.77, Q.78 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:G.21, B:S.77, B:Q.78, B:Q.78 Water bridges: B:S.77 SO4.10: 2 residues within 4Å: Chain B: A.5, R.29 4 PLIP interactions: 4 interactions with chain B Water bridges: B:R.29, B:R.38, B:R.38, B:R.38

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xie, Y. et al., Development of Benzenesulfonamide Derivatives as Potent Glutathione Transferase Omega-1 Inhibitors. J.Med.Chem. (2020)

Release Date

2019-07-24

Peptides

Glutathione S-transferase omega-1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Glutathione S-transferase omega-1

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