SMTL ID : 6ppj.1

Cryo-EM structure of AdnA(D934A)-AdnB(D1014A) in complex with AMPPNP

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 8 residues within 4Å: Chain B: C.807, R.810, A.1021, R.1022, C.1027, C.1030, V.1032, C.1036 0 PLIP interactions:

1 x ANP: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER(Non-covalent)

ANP.2: 9 residues within 4Å: Chain B: G.32, T.33, G.34, K.35, S.36, S.37, Y.313, R.314, R.679 13 PLIP interactions: 13 interactions with chain B Hydrogen bonds: B:G.32, B:K.35, B:K.35, B:K.35, B:S.36, B:S.36, B:S.37, B:R.314, B:R.314, B:R.679, B:R.679 pi-Stacking: B:Y.313, B:Y.313

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jia, N. et al., Structures and single-molecule analysis of bacterial motor nuclease AdnAB illuminate the mechanism of DNA double-strand break resection. Proc.Natl.Acad.Sci.USA (2019)

Release Date

2019-11-20

Peptides

UvrD/REP helicase: A
ATP-dependent DNA helicase (UvrD/REP): B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

UvrD/REP helicase

ATP-dependent DNA helicase (UvrD/REP)

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