SMTL ID : 6ppp.1 (1 other biounit)

Structure of S. pombe Lsm2-8 with processed U6 snRNA

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.33 Å

Oligo State

hetero-1-1-1-1-1-1-1-mer

Ligands

1 x U- U- U- U- U- A: Mimic of processed U6 snRNA(Non-covalent)

U-U-U-U-U-A.1: 27 residues within 4Å: Chain A: F.35, L.36, N.37, R.63, G.64, S.65 Chain B: R.29, H.44, N.46, R.83, G.84, D.85 Chain C: Y.35, M.36, N.37, R.62 Chain E: R.65, N.67 Chain F: M.57 Chain G: H.30, T.31, T.32, N.33, R.61, G.62, E.63, H.94 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Montemayor, E.J. et al., Molecular basis for the distinct cellular functions of the Lsm1-7 and Lsm2-8 complexes. Rna (2020)

Release Date

2020-06-17

Peptides

U6 snRNA-associated Sm-like protein LSm2: A
Probable U6 snRNA-associated Sm-like protein LSm3: B
Probable U6 snRNA-associated Sm-like protein LSm4: C
U6 snRNA-associated Sm-like protein LSm5: D
U6 snRNA-associated Sm-like protein LSm6: E
U6 snRNA-associated Sm-like protein LSm7: F
U6 snRNA-associated Sm-like protein LSm8: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

C
D

D
E

E
F

F
G

G
H

U6 snRNA-associated Sm-like protein LSm2

Probable U6 snRNA-associated Sm-like protein LSm3

Probable U6 snRNA-associated Sm-like protein LSm4

U6 snRNA-associated Sm-like protein LSm5

U6 snRNA-associated Sm-like protein LSm6

U6 snRNA-associated Sm-like protein LSm7

U6 snRNA-associated Sm-like protein LSm8

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