SMTL ID : 6prt.1

Crystal structure of BRD4 bromodomain 1 with N-methylpyrrolidin-2-one (NMP) derivative 10 (methyl [(3R)-1-methyl-5-oxopyrrolidin-3-yl]acetate)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

monomer

Ligands

1 x OWA: methyl [(3R)-1-methyl-5-oxopyrrolidin-3-yl]acetate(Non-covalent)

OWA.1: 11 residues within 4Å: Chain A: W.39, P.40, F.41, V.45, L.50, L.52, Y.55, C.94, Y.97, N.98, I.104 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:L.52 Hydrogen bonds: A:N.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hilton-Proctor, J.P. et al., Synthesis and elaboration of N-methylpyrrolidone as an acetamide fragment substitute in bromodomain inhibition. Bioorg.Med.Chem. (2019)

Release Date

2019-11-27

Peptides

Bromodomain-containing protein 4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain-containing protein 4

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