SMTL ID : 6psy.1

Cryo-EM structure of S. cerevisiae Drs2p-Cdc50p in the autoinhibited apo form

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-mer

Ligands

1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG-NAG.1: 9 residues within 4Å: Chain B: N.199, P.245, N.246, W.247, K.249, K.250, N.305, Y.306, P.307 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:P.307 Hydrogen bonds: B:N.246

2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.2: 3 residues within 4Å: Chain B: V.205, D.214, N.216 No protein-ligand interaction detected (PLIP) NAG.3: 7 residues within 4Å: Chain B: E.213, Y.215, N.216, T.218, N.288, S.290, A.291 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:T.218 Hydrogen bonds: B:E.213, B:N.216, B:S.290

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bai, L. et al., Autoinhibition and activation mechanisms of the eukaryotic lipid flippase Drs2p-Cdc50p. Nat Commun (2019)

Release Date

2019-09-25

Peptides

Probable phospholipid-transporting ATPase DRS2: A
Cell division control protein 50: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
E

Membrane

We predict this structure to be a membrane protein.
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Probable phospholipid-transporting ATPase DRS2

Cell division control protein 50

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