SMTL ID : 6pu9.1

Crystal Structure of the Type B Chloramphenicol O-Acetyltransferase from Vibrio vulnificus

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

homo-trimer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 8 residues within 4Å: Chain A: G.68, W.119, I.120, G.121, S.122, S.140 Chain B: M.74, Q.79 4 PLIP interactions: 3 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:W.119, A:S.122, B:Q.79 Water bridges: A:S.34 EDO.3: 9 residues within 4Å: Chain B: G.68, W.119, I.120, G.121, S.122, S.140 Chain C: Y.48, M.74, Q.79 6 PLIP interactions: 3 interactions with chain C, 3 interactions with chain B Hydrogen bonds: C:Q.79, B:S.122, B:S.140 Water bridges: C:Q.79, C:H.81, B:S.140 EDO.4: 8 residues within 4Å: Chain A: M.74, Q.79 Chain C: G.68, W.119, I.120, G.121, S.122, S.140 4 PLIP interactions: 1 interactions with chain A, 3 interactions with chain C Hydrogen bonds: A:Q.79, C:I.120, C:S.122 Water bridges: C:S.140

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: N.157 Chain B: N.157 Chain C: N.157 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Alcala, A. et al., Structural and functional characterization of three Type B and C chloramphenicol acetyltransferases from Vibrio species. Protein Sci. (2020)

Release Date

2019-08-14

Peptides

Acetyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Acetyltransferase