SMTL ID : 6px9.1 (2 other biounits)

Crystal structure of procaspase-8 in complex with covalent small molecule inhibitor 63-R

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.88 Å

Oligo State

homo-dimer

Ligands

1 x 63R: N-{(3R)-1-[4-(morpholin-4-yl)benzene-1-carbonyl]piperidin-3-yl}-N-phenylacetamide(Covalent)

63R.1: 11 residues within 4Å: Chain B: R.44, N.45, G.46, T.47, H.48, L.49, D.50, Q.142, C.144, V.190, W.204 4 PLIP interactions: 4 interactions with chain B Hydrophobic interactions: B:V.190, B:W.204, B:W.204, B:W.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Xu, J.H. et al., Integrative X-ray Structure and Molecular Modeling for the Rationalization of Procaspase-8 Inhibitor Potency and Selectivity. Acs Chem.Biol. (2020)

Release Date

2020-01-29

Peptides

Caspase-8: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Caspase-8

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