SMTL ID : 6pxx.1

Class D beta-lactamase in complex with beta-lactam antibiotic

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.50 Å
Oligo State
homo-dimer
Ligands
2 x 5R7: (2~{S},3~{R})-3-methyl-2-[(2~{S},3~{R})-3-oxidanyl-1-oxidanylidene-butan-2-yl]-4-[(3~{S},5~{S})-5-[(sulfamoylamino)methyl]pyrrolidin-3-yl]sulfanyl-3,4-dihydro-2~{H}-pyrrole-5-carboxylic acid(Covalent)
5 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
2 x CL: CHLORIDE ION(Non-functional Binders)
1 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Papp-Wallace, K.M. et al., Structural Analysis of The OXA-48 Carbapenemase Bound to A "Poor" Carbapenem Substrate, Doripenem. Antibiotics (2019)
Release Date
2019-10-09
Peptides
Beta-lactamase: AB
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A
B
B

Beta-lactamase