SMTL ID : 6pzp.1

Crystal structure of caspase-1 in complex with VX-765

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.94 Å

Oligo State

hetero-1-1-mer

Ligands

1 x P7S: N-(4-amino-3-chlorobenzene-1-carbonyl)-3-methyl-L-valyl-N-[(2S)-1-carboxy-3-oxopropan-2-yl]-L-prolinamide(Covalent)

P7S.1: 13 residues within 4Å: Chain A: R.60, H.118, G.119, Q.164, C.166 Chain B: V.22, S.23, W.24, R.25, H.26, S.31, V.32, R.67 14 PLIP interactions: 8 interactions with chain B, 6 interactions with chain A Hydrophobic interactions: B:V.22, B:W.24 Hydrogen bonds: B:S.23, B:R.25, B:R.25, B:R.25, B:S.31, A:H.118, A:G.119, A:Q.164, A:C.166 Salt bridges: B:R.25, A:R.60, A:H.118

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, J. et al., Crystal structure of caspase-1 in complex with VX-765. To Be Published

Release Date

2020-08-05

Peptides

Caspase-1: A
Caspase-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Caspase-1

Caspase-1

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