SMTL ID : 6pzv.1 (1 other biounit)

Crystal Structure of Bovine DNMT1 RFTS domain in complex with H3K9me3 and Ubiquitin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

hetero-2-1-1-mer

Ligands

1 x FLC: CITRATE ANION(Non-covalent)

FLC.1: 3 residues within 4Å: Chain C: T.5, L.11, R.67 2 PLIP interactions: 2 interactions with chain C Salt bridges: C:R.67, C:R.67

1 x ZN: ZINC ION(Non-covalent)

ZN.2: 4 residues within 4Å: Chain C: C.4, C.7, C.65, H.69 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.4, C:C.7, C:C.65, C:H.69

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ren, W. et al., Direct readout of heterochromatic H3K9me3 regulates DNMT1-mediated maintenance DNA methylation. Proc.Natl.Acad.Sci.USA (2020)

Release Date

2020-07-15

Peptides

Ubiquitin: AB
DNA (cytosine-5)-methyltransferase 1: C
Histone H3.3: D

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Ubiquitin

DNA (cytosine-5)-methyltransferase 1

Histone H3.3

Related Entries With Identical Sequence