SMTL ID : 6q1m.1

Crystal structure of the wheat dwarf virus Rep domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.24 Å

Oligo State

monomer

Ligands

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 2 residues within 4Å: Chain A: A.77, N.79 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.79 GOL.2: 5 residues within 4Å: Chain A: Y.12, S.13, K.14, Y.15, R.69 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.12, A:K.14, A:R.69 GOL.3: 5 residues within 4Å: Chain A: F.17, Q.102, V.103, Y.106 Ligands: GOL.4 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Q.102 Water bridges: A:K.98, A:D.99 GOL.4: 7 residues within 4Å: Chain A: F.17, Q.95, A.96, A.97, K.98, V.103 Ligands: GOL.3 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:A.96, A:K.98 Water bridges: A:Q.95, A:Q.95, A:D.99

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Everett, B.A. et al., Crystal structure of the Wheat dwarf virus Rep domain. Acta Crystallogr.,Sect.F (2019)

Release Date

2019-12-11

Peptides

Replication-associated protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Replication-associated protein