SMTL ID : 6q1y.1

Crystal Structure of Enoyl-[acyl-carrier-protein] reductase from Mycobacterium avium with bound NAD

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.65 Å

Oligo State

monomer

Ligands

1 x NAD: NICOTINAMIDE-ADENINE-DINUCLEOTIDE(Non-covalent)

NAD.1: 23 residues within 4Å: Chain A: G.22, I.23, I.24, S.28, I.29, F.49, L.71, D.72, V.73, S.102, I.103, G.104, I.130, M.155, D.156, F.157, K.173, A.199, G.200, P.201, I.202, T.204, M.207 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:F.157, A:A.199 Hydrogen bonds: A:G.22, A:S.28, A:I.29, A:D.72, A:V.73, A:I.103, A:G.104, A:K.173, A:I.202, A:I.202, A:T.204 Water bridges: A:G.22, A:A.30, A:F.49, A:I.103, A:G.104, A:L.205 pi-Stacking: A:F.49

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.2: 5 residues within 4Å: Chain A: D.60, L.62, P.63, E.64, K.65 No protein-ligand interaction detected (PLIP)

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 2 residues within 4Å: Chain A: Y.133, K.140 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.140

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.4: 3 residues within 4Å: Chain A: V.214, L.215, G.216 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.215

2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.5: 4 residues within 4Å: Chain A: I.24, R.51, F.105, L.205 2 PLIP interactions: 2 interactions with chain A Water bridges: A:D.50, A:R.51 PG4.6: 2 residues within 4Å: Chain A: K.241, D.242 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Romanaggi, C.T. et al., Crystal Structure of Enoyl-[acyl-carrier-protein] reductase from Mycobacterium avium with bound NAD. to be published

Release Date

2019-08-14

Peptides

Enoyl-[acyl-carrier-protein] reductase [NADH]: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Enoyl-[acyl-carrier-protein] reductase [NADH]