SMTL ID : 6q2d.1

Crystal structure of Methanobrevibacter smithii Dph2 in complex with Methanobrevibacter smithii elongation factor 2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.45 Å

Oligo State

hetero-2-2-mer

Ligands

2 x SF4: IRON/SULFUR CLUSTER(Covalent)(Non-covalent)

SF4.1: 8 residues within 4Å: Chain A: F.61, G.62, C.64, L.162, C.164, Q.245, C.292, I.330 3 PLIP interactions: 3 interactions with chain A, Metal complexes: A:C.64, A:C.164, A:C.292 SF4.2: 8 residues within 4Å: Chain B: F.61, C.64, L.162, G.163, C.164, C.292, R.294, I.330 3 PLIP interactions: 3 interactions with chain B, Metal complexes: B:C.64, B:C.164, B:C.292

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Fenwick, M.K. et al., The Crystal Structure of Dph2 in Complex with Elongation Factor 2 Reveals the Structural Basis for the First Step of Diphthamide Biosynthesis. Biochemistry (2019)

Release Date

2019-10-16

Peptides

2-(3-amino-3-carboxypropyl)histidine synthase: AB
Elongation factor 2: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
F

2-(3-amino-3-carboxypropyl)histidine synthase

Elongation factor 2

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