- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.60 Å
- Oligo State
- hetero-3-3-1-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 5 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: T.176, D.261
- Ligands: ATP.1
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:T.176, H2O.1, H2O.1, H2O.1
MG.4: 2 residues within 4Å:- Chain B: T.176
- Ligands: ATP.3
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:T.176, H2O.1, H2O.1, H2O.1
MG.6: 3 residues within 4Å:- Chain C: T.176, D.261
- Ligands: ATP.5
4 PLIP interactions:1 interactions with chain C, 3 Ligand-Water interactions- Metal complexes: C:T.176, H2O.1, H2O.1, H2O.1
MG.8: 3 residues within 4Å:- Chain D: T.156, R.182
- Ligands: ADP.7
5 PLIP interactions:1 interactions with chain D, 4 Ligand-Water interactions- Metal complexes: D:T.156, H2O.1, H2O.1, H2O.1, H2O.1
MG.10: 5 residues within 4Å:- Chain F: T.156, E.181, R.182, E.185
- Ligands: ADP.9
5 PLIP interactions:1 interactions with chain F, 4 Ligand-Water interactions- Metal complexes: F:T.156, H2O.1, H2O.1, H2O.1, H2O.1
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.7: 15 residues within 4Å:- Chain C: S.364, R.365
- Chain D: G.150, A.151, G.152, V.153, G.154, K.155, T.156, V.157, Y.332, F.405, A.408, F.411
- Ligands: MG.8
16 PLIP interactions:14 interactions with chain D, 2 interactions with chain C- Hydrogen bonds: D:G.150, D:G.152, D:V.153, D:G.154, D:K.155, D:T.156, D:V.157, D:Y.332
- Water bridges: D:K.155, D:T.156, D:R.182, D:R.182, D:R.182
- Salt bridges: D:K.155, C:R.365, C:R.365
ADP.9: 13 residues within 4Å:- Chain B: V.363, R.365
- Chain F: G.150, G.152, V.153, G.154, K.155, T.156, V.157, Y.332, F.405, F.411
- Ligands: MG.10
20 PLIP interactions:18 interactions with chain F, 2 interactions with chain B- Hydrogen bonds: F:G.150, F:G.152, F:V.153, F:G.154, F:K.155, F:T.156, F:V.157, F:R.182, F:Y.332, B:R.365
- Water bridges: F:K.155, F:T.156, F:T.156, F:E.181, F:R.182, F:D.243
- Salt bridges: F:K.155, B:R.365
- pi-Stacking: F:Y.332, F:Y.332
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Petri, J. et al., Structure of F1-ATPase from the obligate anaerobe Fusobacterium nucleatum. Open Biology (2019)
- Release Date
- 2019-07-10
- Peptides
- ATP synthase subunit alpha: ABC
ATP synthase subunit beta: DEF
ATP synthase gamma chain: G
ATP synthase epsilon chain: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.60 Å
- Oligo State
- hetero-3-3-1-1-mer
- Ligands
- 3 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)
- 5 x MG: MAGNESIUM ION(Non-covalent)
- 2 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Petri, J. et al., Structure of F1-ATPase from the obligate anaerobe Fusobacterium nucleatum. Open Biology (2019)
- Release Date
- 2019-07-10
- Peptides
- ATP synthase subunit alpha: ABC
ATP synthase subunit beta: DEF
ATP synthase gamma chain: G
ATP synthase epsilon chain: H - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
FG
GH
H