SMTL ID : 6q50.1

Structure of MPT-4, a mannose phosphorylase from Leishmania mexicana, in complex with phosphate ion

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 9 residues within 4Å: Chain A: K.153, D.154, R.170, R.172, W.209, H.228, Y.244, F.285 Ligands: NA.3 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:D.154, A:Y.244 Water bridges: A:S.4, A:S.4, A:D.103, A:R.172 Salt bridges: A:K.153, A:R.170, A:R.172, A:H.228

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 8 residues within 4Å: Chain A: E.102, D.103, Y.105, G.117, T.118, K.153, D.154, R.156 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:T.118, A:T.118, A:D.154, A:D.154, A:R.156, A:R.156 Water bridges: A:Y.105, A:I.155

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: S.4, D.103, K.153 Ligands: PO4.1 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.4, A:S.4, A:K.153 Water bridges: A:S.3, A:D.103

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sernee, M.F. et al., A Family of Dual-Activity Glycosyltransferase-Phosphorylases Mediates Mannogen Turnover and Virulence in Leishmania Parasites. Cell Host Microbe (2019)

Release Date

2019-09-25

Peptides

MPT-4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

MPT-4