SMTL ID : 6q96.2 (1 other biounit)

HDM2 (17-111, WILD TYPE) COMPLEXED WITH COMPOUND 12 AT 1.8A; Structural states of Hdm2 and HdmX: X-ray elucidation of adaptations and binding interactions for different chemical compound classes

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x HRE: 4-[(4~{S})-5-(5-chloranyl-2-oxidanylidene-1~{H}-pyridin-3-yl)-2-[2-(dimethylamino)-4-methoxy-pyrimidin-5-yl]-6-oxidanylidene-3-propan-2-yl-4~{H}-pyrrolo[3,4-c]pyrazol-4-yl]benzenecarbonitrile(Non-covalent)

HRE.1: 13 residues within 4Å: Chain A: L.39, L.42, G.43, I.46, M.47, Y.52, Q.57, F.71, F.76, V.78, H.81, I.84, Y.85 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.39, A:I.46, A:I.46, A:V.78, A:I.84 pi-Stacking: A:H.81 Halogen bonds: A:H.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kallen, J. et al., Structural States of Hdm2 and HdmX: X-ray Elucidation of Adaptations and Binding Interactions for Different Chemical Compound Classes. Chemmedchem (2019)

Release Date

2019-05-15

Peptides

E3 ubiquitin-protein ligase Mdm2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase Mdm2

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