SMTL ID : 6qfm.1

Structure of human Mcl-1 in complex with PUMA BH3 peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

3 x ZN: ZINC ION(Non-covalent)

ZN.1: 2 residues within 4Å: Chain A: H.87 Ligands: CL.5 3 PLIP interactions: 1 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.87, H2O.3, H2O.3 ZN.2: 3 residues within 4Å: Chain A: H.59 Ligands: CL.4, CL.6 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:H.59 ZN.3: 3 residues within 4Å: Chain A: D.71, D.77, H.112 5 PLIP interactions: 5 interactions with chain A Metal complexes: A:D.71, A:D.71, A:D.77, A:D.77, A:H.112

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 4 residues within 4Å: Chain A: N.58, H.59 Ligands: ZN.2, CL.6 Ligand excluded by PLIP CL.5: 4 residues within 4Å: Chain A: V.86, H.87, K.90 Ligands: ZN.1 Ligand excluded by PLIP CL.6: 6 residues within 4Å: Chain A: H.59 Chain B: M.18, D.21, L.22 Ligands: ZN.2, CL.4 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Murray, J.B. et al., Establishing Drug Discovery and Identification of Hit Series for the Anti-apoptotic Proteins, Bcl-2 and Mcl-1. Acs Omega (2019)

Release Date

2019-06-12

Peptides

Induced myeloid leukemia cell differentiation protein Mcl-1: A
Bcl-2-binding component 3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Induced myeloid leukemia cell differentiation protein Mcl-1

Bcl-2-binding component 3

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