SMTL ID : 6qhk.1

PAO-linked dimer of the catalytic domain of the human ubiquitin-conjugating enzyme UBE2S

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.96 Å

Oligo State

homo-dimer

Ligands

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: G.89, A.90, N.91, G.92, E.93 Ligand excluded by PLIP

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 12 residues within 4Å: Chain A: L.64, P.74, P.75, K.76, G.77, I.94, C.95, V.96, L.99, K.100, V.112, I.116 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.77, A:V.96, A:V.96 EDO.3: 2 residues within 4Å: Chain A: N.97, S.127 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.127 EDO.5: 8 residues within 4Å: Chain A: P.28, D.29, R.110, L.114 Chain B: P.28, D.29, R.110, L.114 6 PLIP interactions: 3 interactions with chain A, 3 interactions with chain B Hydrogen bonds: A:D.29, A:R.110, A:R.110, B:D.29, B:R.110, B:R.110

1 x PA0: Phenylarsine oxide(Non-covalent)

PA0.4: 10 residues within 4Å: Chain A: V.96, V.98, T.115, C.118, L.119, H.122, N.124 Chain B: V.98, T.115, C.118 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:V.98, A:L.119, A:H.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liess, A.K.L. et al., Autoinhibition Mechanism of the Ubiquitin-Conjugating Enzyme UBE2S by Autoubiquitination. Structure (2019)

Release Date

2019-07-17

Peptides

Ubiquitin-conjugating enzyme E2 S: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin-conjugating enzyme E2 S

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