SMTL ID : 6qi6.1

Trigonal form of WT recombinant bovine beta-lactoglobulin

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 2 residues within 4Å: Chain A: T.76, K.77 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.77 EDO.2: 3 residues within 4Å: Chain A: L.39, I.71, M.107 No protein-ligand interaction detected (PLIP) EDO.4: 2 residues within 4Å: Chain B: T.76, K.77 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.77 EDO.5: 3 residues within 4Å: Chain B: L.39, I.71, M.107 No protein-ligand interaction detected (PLIP)

2 x EOH: ETHANOL(Non-functional Binders)

EOH.3: 3 residues within 4Å: Chain A: R.148 Chain B: M.145, R.148 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain A Hydrophobic interactions: B:R.148 Hydrogen bonds: B:M.145, A:R.148 EOH.6: 3 residues within 4Å: Chain A: M.145, R.148 Chain B: R.148 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:R.148, A:M.145 Hydrophobic interactions: A:R.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonarek, P. et al., Structure-based design approach to rational site-directed mutagenesis of beta-lactoglobulin. J.Struct.Biol. (2020)

Release Date

2019-01-30

Peptides

Beta-lactoglobulin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Beta-lactoglobulin

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