SMTL ID : 6qkg.2 (1 other biounit)

2-Naphthoyl-CoA Reductase(NCR)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x SF4: IRON/SULFUR CLUSTER(Non-covalent)

SF4.1: 12 residues within 4Å: Chain A: R.344, I.347, C.367, T.368, A.369, C.370, N.371, G.373, C.374, C.386, M.387, V.388 4 PLIP interactions: 4 interactions with chain A, Metal complexes: A:C.367, A:C.370, A:C.374, A:C.386

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.2: 32 residues within 4Å: Chain A: M.387, V.414, G.415, A.416, G.417, P.418, S.419, M.437, E.438, K.439, G.445, E.446, G.450, L.456, W.459, T.481, E.482, A.483, A.499, T.500, G.501, G.502, L.524, E.541, I.542, Q.545, T.546, G.648, D.649, K.655, L.656, A.659 23 PLIP interactions: 23 interactions with chain A Hydrophobic interactions: A:E.446, A:L.524, A:I.542, A:I.542 Hydrogen bonds: A:A.416, A:S.419, A:S.419, A:S.419, A:K.439, A:E.446, A:A.483, A:A.483, A:G.502, A:Q.545, A:D.649, A:L.656 Water bridges: A:G.417, A:G.420, A:G.501, A:C.650, A:Y.657 pi-Stacking: A:W.459 pi-Cation interactions: A:K.655

1 x FMN: FLAVIN MONONUCLEOTIDE(Non-covalent)

FMN.3: 23 residues within 4Å: Chain A: A.35, A.36, T.37, V.38, Q.71, G.72, Q.114, M.116, C.192, I.194, R.245, I.291, A.319, Y.320, R.321, M.342, C.343, R.344, P.345, C.374, F.375, V.378, M.384 19 PLIP interactions: 19 interactions with chain A Hydrophobic interactions: A:T.37, A:R.344, A:F.375, A:F.375, A:V.378 Hydrogen bonds: A:A.36, A:V.38, A:G.72, A:Q.114, A:Q.114, A:R.245, A:R.245, A:Y.320, A:R.321, A:C.343, A:R.344 Water bridges: A:M.322, A:E.341 Salt bridges: A:R.344

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Willistein, M. et al., Low potential enzymatic hydride transfer via highly cooperative and inversely functionalized flavin cofactors. Nat Commun (2019)

Release Date

2019-05-15

Peptides

NCR A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

NCR A

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