SMTL ID : 6qtr.1

Crystal structure of a mutant Arabidopsis WD40 domain in complex with a transcription factor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.37 Å

Oligo State

hetero-1-1-mer

Ligands

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 3 residues within 4Å: Chain A: S.282, H.283, R.284 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:S.282, A:R.284 Water bridges: A:T.281, A:H.283, A:H.283 Salt bridges: A:H.283 SO4.2: 4 residues within 4Å: Chain A: K.85, D.125, R.128, K.167 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:D.125 Water bridges: A:R.128, A:K.167 Salt bridges: A:K.85, A:R.128, A:K.167

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 7 residues within 4Å: Chain A: N.169, Y.175, Y.187, L.197, N.215, V.232, K.233 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.187 Water bridges: A:N.169, A:N.216

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lau, K. et al., Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs. Embo J. (2019)

Release Date

2019-07-10

Peptides

E3 ubiquitin-protein ligase COP1: A
Transcription factor HY5: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

E3 ubiquitin-protein ligase COP1

Transcription factor HY5

Related Entries With Identical Sequence