- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x JJ2: 1-[(3,4-dichlorophenyl)methyl]-5-[2-(dimethylamino)ethyl]pyrrolo[3,2-c]pyridin-4-one(Non-covalent)
- 4 x CIT: CITRIC ACID(Non-functional Binders)
CIT.2: 13 residues within 4Å:- Chain A: C.125, G.126, G.127, R.193, G.218, D.219, G.220, T.221, K.246, R.294, S.361, N.363
- Ligands: JJ2.1
13 PLIP interactions:13 interactions with chain A- Hydrogen bonds: A:G.127, A:G.218, A:G.220, A:T.221, A:T.221, A:T.221, A:K.246, A:N.363
- Water bridges: A:D.219
- Salt bridges: A:R.193, A:K.246, A:K.246, A:R.294
CIT.5: 8 residues within 4Å:- Chain B: C.125, G.126, G.127, G.218, D.219, G.220, T.221, K.246
10 PLIP interactions:10 interactions with chain B- Hydrogen bonds: B:G.127, B:G.194, B:G.218, B:G.220, B:T.221, B:T.221, B:K.246, B:K.246
- Salt bridges: B:R.193, B:K.246
CIT.8: 11 residues within 4Å:- Chain C: C.125, G.126, G.127, R.193, G.194, G.218, D.219, G.220, T.221, K.246
- Ligands: JJ2.7
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:C.125, C:G.127, C:G.194, C:G.218, C:G.220, C:T.221
- Salt bridges: C:R.193, C:K.246
CIT.11: 11 residues within 4Å:- Chain D: C.125, G.126, G.127, R.193, G.194, G.218, D.219, G.220, T.221, K.246
- Ligands: JJ2.10
13 PLIP interactions:13 interactions with chain D- Hydrogen bonds: D:C.125, D:C.125, D:G.127, D:G.194, D:G.218, D:G.220, D:T.221, D:T.221, D:T.221, D:K.246
- Salt bridges: D:R.193, D:K.246, D:R.294
- 4 x GOL: GLYCEROL(Non-functional Binders)
GOL.3: 8 residues within 4Å:- Chain A: I.312, C.313, L.314, N.318, I.320, W.464, R.468, T.471
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:C.313, A:N.318, A:T.471, A:T.471
GOL.6: 6 residues within 4Å:- Chain B: I.312, C.313, L.314, N.318, W.464, T.471
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:C.313, B:N.318, B:T.471, B:T.471
GOL.9: 8 residues within 4Å:- Chain C: I.312, C.313, N.318, I.320, W.464, R.468, T.471, V.472
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:C.313, C:N.318, C:R.468
GOL.12: 8 residues within 4Å:- Chain D: I.312, C.313, L.314, N.318, I.320, W.464, R.468, T.471
4 PLIP interactions:4 interactions with chain D- Hydrogen bonds: D:C.313, D:N.318, D:N.318, D:T.471
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McNae, I.W. et al., Fast acting allosteric phosphofructokinase inhibitors block trypanosome glycolysis and cure acute African trypanosomiasis in mice. Nat Commun (2021)
- Release Date
- 2020-03-18
- Peptides
- ATP-dependent 6-phosphofructokinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.75 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x JJ2: 1-[(3,4-dichlorophenyl)methyl]-5-[2-(dimethylamino)ethyl]pyrrolo[3,2-c]pyridin-4-one(Non-covalent)
- 4 x CIT: CITRIC ACID(Non-functional Binders)
- 4 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- McNae, I.W. et al., Fast acting allosteric phosphofructokinase inhibitors block trypanosome glycolysis and cure acute African trypanosomiasis in mice. Nat Commun (2021)
- Release Date
- 2020-03-18
- Peptides
- ATP-dependent 6-phosphofructokinase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
D