SMTL ID : 6qws.1

Crystal structure of the Ski2 RNA-helicase Brr2 from Chaetomium thermophilum in the apo state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: P.934, T.935, G.936, S.937, G.938, K.939, T.940 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.936, A:S.937, A:G.938, A:K.939, A:T.940 Salt bridges: A:K.939 SO4.2: 5 residues within 4Å: Chain A: T.85, G.86, G.88, K.89, T.90 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.88, A:K.89, A:T.90 SO4.3: 5 residues within 4Å: Chain A: E.967, E.1206, D.1233, V.1234, E.1237 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.1237 SO4.4: 3 residues within 4Å: Chain A: Q.158, H.1118, R.1447 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.185 Salt bridges: A:H.1118, A:R.1447 SO4.5: 5 residues within 4Å: Chain A: H.1101, R.1103, L.1107, L.1302, N.1303 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:L.1302 Salt bridges: A:H.1101, A:R.1103 SO4.6: 4 residues within 4Å: Chain A: S.1149, K.1151, R.1446, R.1447 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.1149, A:R.1447

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Absmeier, E. et al., Molecular Mechanism Underlying Inhibition of Intrinsic ATPase Activity in a Ski2-like RNA Helicase. Structure (2020)

Release Date

2020-01-15

Peptides

Pre-mRNA splicing helicase-like protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Pre-mRNA splicing helicase-like protein

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