SMTL ID : 6qzm.1

H30 MnSOD-3 Mutant I

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-tetramer

Ligands

4 x MN: MANGANESE (II) ION(Non-covalent)

MN.1: 4 residues within 4Å: Chain A: H.26, H.74, D.155, H.159 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.26, A:H.74, A:D.155, A:H.159, H2O.2 MN.3: 4 residues within 4Å: Chain B: H.26, H.74, D.155, H.159 5 PLIP interactions: 4 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:H.26, B:H.74, B:D.155, B:H.159, H2O.9 MN.6: 4 residues within 4Å: Chain C: H.26, H.74, D.155, H.159 5 PLIP interactions: 4 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:H.26, C:H.74, C:D.155, C:H.159, H2O.17 MN.8: 4 residues within 4Å: Chain D: H.26, H.74, D.155, H.159 5 PLIP interactions: 4 interactions with chain D, 1 Ligand-Water interactions Metal complexes: D:H.26, D:H.74, D:D.155, D:H.159, H2O.24

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: H.2, T.3, H.71 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.3, A:T.3 Water bridges: A:T.3 Salt bridges: A:H.2, A:H.71 SO4.4: 3 residues within 4Å: Chain B: H.2, T.3, H.71 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:T.3 Water bridges: B:H.2, B:T.3, B:H.71 Salt bridges: B:H.2, B:H.71 SO4.5: 3 residues within 4Å: Chain B: K.29 Chain D: N.167, V.168 4 PLIP interactions: 2 interactions with chain D, 2 interactions with chain B Hydrogen bonds: D:N.167, D:N.167 Water bridges: B:T.33 Salt bridges: B:K.29 SO4.7: 3 residues within 4Å: Chain C: H.2, T.3, H.71 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:T.3, C:T.3 Salt bridges: C:H.2, C:H.71 SO4.9: 3 residues within 4Å: Chain D: H.2, T.3, H.71 6 PLIP interactions: 6 interactions with chain D Hydrogen bonds: D:T.3 Water bridges: D:H.2, D:H.2, D:H.71 Salt bridges: D:H.2, D:H.71 SO4.10: 3 residues within 4Å: Chain B: N.167, V.168 Chain D: K.29 3 PLIP interactions: 2 interactions with chain B, 1 interactions with chain D Hydrogen bonds: B:N.167, B:N.167 Salt bridges: D:K.29

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bonetta, R. et al., H30 MnSOD-3 Mutant II. To Be Published

Release Date

2020-02-19

Peptides

Superoxide dismutase [Mn] 2, mitochondrial: ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
A

D
C

Superoxide dismutase [Mn] 2, mitochondrial