SMTL ID : 6r0f.2 (1 other biounit)

Getah virus macro domain in complex with ADPr, pose 1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

monomer

Ligands

1 x AR6: [(2R,3S,4R,5R)-5-(6-AMINOPURIN-9-YL)-3,4-DIHYDROXY-OXOLAN-2-YL]METHYL [HYDROXY-[[(2R,3S,4R,5S)-3,4,5-TRIHYDROXYOXOLAN-2-YL]METHOXY]PHOSPHORYL] HYDROGEN PHOSPHATE(Non-covalent)

AR6.1: 22 residues within 4Å: Chain A: A.11, D.12, I.13, A.24, A.25, N.26, T.30, S.32, D.33, G.34, V.35, C.36, A.38, L.110, L.111, S.112, T.113, G.114, T.115, F.116, R.146, W.150 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:D.12, A:I.13, A:N.26, A:S.32, A:S.32, A:S.32, A:S.32, A:V.35, A:S.112, A:T.113, A:G.114, A:T.115, A:T.115, A:F.116, A:R.146 Water bridges: A:N.23, A:L.110 pi-Cation interactions: A:R.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ferreira-Ramos, A.S. et al., Snapshots of ADP-ribose bound to Getah virus macro domain reveal an intriguing choreography. Sci Rep (2020)

Release Date

2020-04-01

Peptides

Non-structural polyprotein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Non-structural polyprotein

Related Entries With Identical Sequence