SMTL ID : 6r1s.1

EthR ligand complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

2 x JPK: 2-(3-methylphenyl)-~{N}-[[2-(oxan-4-yl)-7-oxidanyl-pyrazolo[1,5-a]pyrimidin-5-yl]methyl]ethanamide(Non-covalent)

JPK.1: 19 residues within 4Å: Chain A: L.87, M.102, W.103, G.106, I.107, F.110, F.114, W.138, M.142, W.145, Y.148, T.149, V.152, N.176, N.179, E.180, L.183, F.184, W.207 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:L.87, A:W.103, A:F.110, A:F.114, A:W.138, A:W.145, A:Y.148, A:Y.148, A:V.152, A:L.183, A:L.183 Hydrogen bonds: A:N.176, A:N.179 JPK.2: 19 residues within 4Å: Chain B: L.87, M.102, W.103, G.106, I.107, F.110, F.114, W.138, M.142, W.145, Y.148, T.149, V.152, N.176, N.179, E.180, L.183, F.184, W.207 13 PLIP interactions: 13 interactions with chain B Hydrophobic interactions: B:L.87, B:W.103, B:F.110, B:F.114, B:W.138, B:W.145, B:Y.148, B:Y.148, B:V.152, B:L.183, B:L.183 Hydrogen bonds: B:N.176, B:N.179

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tatum, N.J. et al., Relative Binding Energies Predict Crystallographic Binding Modes of Ethionamide Booster Lead Compounds. J Phys Chem Lett (2019)

Release Date

2020-02-19

Peptides

HTH-type transcriptional regulator EthR: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

HTH-type transcriptional regulator EthR

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