SMTL ID : 6r2f.1 (1 other biounit)

Crystal structure of TEX12 F102A F109E V116A in an alternative conformation

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.29 Å

Oligo State

homo-dimer

Ligands

3 x MPD: (4S)-2-METHYL-2,4-PENTANEDIOL(Non-functional Binders)

MPD.1: 7 residues within 4Å: Chain A: Y.27, L.30, L.31, R.34 Chain B: F.49, A.52 Ligands: CL.2 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:Y.27, A:L.30, A:R.34, B:A.52 Hydrogen bonds: A:R.34 MPD.3: 1 residues within 4Å: Chain B: R.63 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.63 MPD.4: 6 residues within 4Å: Chain A: S.40, Y.41 Chain B: V.37, S.40, Y.41, E.44 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:Y.41, B:E.44 Hydrogen bonds: A:S.40, A:S.40

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 3 residues within 4Å: Chain A: Y.27, L.31 Ligands: MPD.1 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dunce, J.M. et al., Meiotic synaptonemal complex extension through fibrous assembly of SYCE2-TEX12. To Be Published

Release Date

2020-04-01

Peptides

Testis-expressed protein 12: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Testis-expressed protein 12

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