SMTL ID : 6r5k.1

Cryo-EM structure of a poly(A) RNP bound to the Pan2-Pan3 deadenylase

Coordinates

PDB Format

Method

ELECTRON MICROSCOPY 4.80 Å

Oligo State

hetero-1-3-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: H.1015, L.1047, S.1048 Chain C: A.65, A.66 Ligands: MG.2 No protein-ligand interaction detected (PLIP) MG.2: 7 residues within 4Å: Chain A: H.1015, L.1047, S.1048, L.1049 Chain C: A.65, A.66 Ligands: MG.1 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:L.1047

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Schafer, I.B. et al., Molecular Basis for poly(A) RNP Architecture and Recognition by the Pan2-Pan3 Deadenylase. Cell (2019)

Release Date

2019-05-29

Peptides

PAN2-PAN3 deadenylation complex catalytic subunit PAN2: A
Polyadenylate-binding protein, cytoplasmic and nuclear: BDE
PAN2-PAN3 deadenylation complex subunit PAN3: F
PAN2-PAN3 deadenylation complex subunit PAN3: G

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

D
F

E
H

F
N

G
O

PAN2-PAN3 deadenylation complex catalytic subunit PAN2

Polyadenylate-binding protein, cytoplasmic and nuclear

PAN2-PAN3 deadenylation complex subunit PAN3

PAN2-PAN3 deadenylation complex subunit PAN3