SMTL ID : 6ra7.1

Human tnik in complex with compound 9

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.20 Å

Oligo State

monomer

Ligands

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: F.180, I.181, G.182, P.184, M.187 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.182 Water bridges: A:G.182

1 x MG: MAGNESIUM ION(Non-covalent)

MG.2: 5 residues within 4Å: Chain A: S.69, H.70, H.71, I.74, T.76 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.69, A:H.71, A:I.74, A:T.76, H2O.1

1 x JWK: 2-[8-azanyl-2-(2-fluoranylpyridin-4-yl)-1,7-naphthyridin-5-yl]propan-2-ol(Non-covalent)

JWK.3: 14 residues within 4Å: Chain A: V.23, Y.28, V.31, A.44, K.46, E.61, M.97, E.98, F.99, C.100, G.103, L.152, V.162, D.163 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Y.28, A:V.31, A:F.99, A:L.152, A:L.152, A:V.162 Hydrogen bonds: A:K.46, A:E.98, A:C.100 Water bridges: A:G.24 pi-Stacking: A:Y.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Read, J.A., Tool inhibitors and assays to interrogate the biology of the TRAF2 and NCK interacting kinase. To Be Published

Release Date

2019-11-06

Peptides

TRAF2 and NCK-interacting protein kinase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

TRAF2 and NCK-interacting protein kinase

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