SMTL ID : 6rag.1

Heterodimeric ABC exporter TmrAB in inward-facing wide conformation under turnover conditions

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-1-1-1-mer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain A: T.400, Q.441, D.522 Ligands: ADP.2 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:T.400, A:D.522 MG.3: 4 residues within 4Å: Chain B: K.377, S.378, Q.419 Ligands: ATP.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:S.378

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.2: 10 residues within 4Å: Chain A: D.126, Y.362, T.395, G.396, G.398, K.399, T.400, Q.441, D.522 Ligands: MG.1 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:D.126, A:G.396, A:G.396, A:G.398, A:T.400 Salt bridges: A:K.399, A:K.399 pi-Stacking: A:Y.362

1 x ATP: ADENOSINE-5'-TRIPHOSPHATE(Non-covalent)

ATP.4: 13 residues within 4Å: Chain B: R.348, D.349, L.353, G.374, S.375, G.376, K.377, S.378, L.379, Q.419, D.500, H.531 Ligands: MG.3 10 PLIP interactions: 10 interactions with chain B Hydrogen bonds: B:G.374, B:G.376, B:K.377, B:S.378, B:L.379, B:Q.419, B:D.500 Salt bridges: B:K.377, B:K.377, B:K.377

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hofmann, S. et al., Conformation space of a heterodimeric ABC exporter under turnover conditions. Nature (2019)

Release Date

2019-07-31

Peptides

Multidrug resistance ABC transporter ATP-binding and permease protein: A
Multidrug resistance ABC transporter ATP-binding and permease protein: B
Nanobody Nb9F10: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

Membrane

We predict this structure to be a membrane protein.
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Multidrug resistance ABC transporter ATP-binding and permease protein

Multidrug resistance ABC transporter ATP-binding and permease protein

Nanobody Nb9F10

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