- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DXT: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 2 residues within 4Å:- Chain A: H.99
- Ligands: DXT.1
4 PLIP interactions:1 interactions with chain A, 3 Ligand-Water interactions- Metal complexes: A:H.99, H2O.2, H2O.4, H2O.4
MG.10: 2 residues within 4Å:- Chain B: H.99
- Ligands: DXT.9
4 PLIP interactions:1 interactions with chain B, 3 Ligand-Water interactions- Metal complexes: B:H.99, H2O.8, H2O.10, H2O.10
- 12 x CL: CHLORIDE ION(Non-functional Binders)
CL.3: 3 residues within 4Å:- Chain A: L.100, G.101
- Chain B: A.146
Ligand excluded by PLIPCL.4: 2 residues within 4Å:- Chain A: R.2, L.3
Ligand excluded by PLIPCL.5: 3 residues within 4Å:- Chain A: N.4, R.5, E.6
Ligand excluded by PLIPCL.6: 2 residues within 4Å:- Chain A: T.25, T.26
Ligand excluded by PLIPCL.7: 2 residues within 4Å:- Chain A: S.1, R.2
Ligand excluded by PLIPCL.8: 1 residues within 4Å:- Chain A: L.168
Ligand excluded by PLIPCL.11: 3 residues within 4Å:- Chain A: A.146
- Chain B: L.100, G.101
Ligand excluded by PLIPCL.12: 2 residues within 4Å:- Chain B: R.2, L.3
Ligand excluded by PLIPCL.13: 3 residues within 4Å:- Chain B: N.4, R.5, E.6
Ligand excluded by PLIPCL.14: 2 residues within 4Å:- Chain B: T.25, T.26
Ligand excluded by PLIPCL.15: 2 residues within 4Å:- Chain B: S.1, R.2
Ligand excluded by PLIPCL.16: 1 residues within 4Å:- Chain B: L.168
Ligand excluded by PLIP- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Palm, G.J. et al., Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding. Biochim Biophys Acta Proteins Proteom (2020)
- Release Date
- 2019-08-21
- Peptides
- Tetracycline repressor protein class D: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.90 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x DXT: (4S,4AR,5S,5AR,6R,12AS)-4-(DIMETHYLAMINO)-3,5,10,12,12A-PENTAHYDROXY-6-METHYL-1,11-DIOXO-1,4,4A,5,5A,6,11,12A-OCTAHYDROTETRACENE-2-CARBOXAMIDE(Non-covalent)
- 2 x MG: MAGNESIUM ION(Non-covalent)
- 12 x CL: CHLORIDE ION(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Palm, G.J. et al., Thermodynamics, cooperativity and stability of the tetracycline repressor (TetR) upon tetracycline binding. Biochim Biophys Acta Proteins Proteom (2020)
- Release Date
- 2019-08-21
- Peptides
- Tetracycline repressor protein class D: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A