SMTL ID : 6rcy.1

CRYSTAL STRUCTURE OF FK1 DOMAIN OF FKBP52 IN COMPLEX WITH A BIO-INSPIRED HYBRID FLUORESCENT LIGAND

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x K0T: (2~{S})-5-carbamimidamido-2-[[(2~{S})-2-[[(2~{S})-1-[5-(dimethylamino)naphthalen-1-yl]sulfonylpiperidin-2-yl]carbonylamino]-4-phenyl-butanoyl]amino]pentanoic acid(Non-covalent)

K0T.1: 14 residues within 4Å: Chain A: Y.57, F.67, D.68, F.77, G.84, E.85, V.86, I.87, K.88, W.90, Y.113, S.118, I.122, F.130 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:Y.57, A:F.77, A:W.90, A:W.90, A:Y.113, A:I.122, A:F.130 Hydrogen bonds: A:E.85, A:I.87, A:Y.113 Water bridges: A:G.84 pi-Cation interactions: A:W.90, A:K.121, A:K.121

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

de la Sierra-Gallay, I.L. et al., Bioinspired Hybrid Fluorescent Ligands for the FK1 Domain of FKBP52. J.Med.Chem. (2020)

Release Date

2020-05-13

Peptides

Peptidyl-prolyl cis-trans isomerase FKBP4: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase FKBP4